SeekSoulTools

SeekSoulTools is a software developed by SEEKGENE for processing single-cell transcriptome data. Currently, the software contains two modules.

1. rna module: This module is used for identifying cell barcode, genome alignment and gene quantification to obtain a feature-barcode matrix that can be used for downstream analsis, followed by cell clustering and differential analysis. This module not only support data from SeekOne® transcriptome kits, it also supports a variety of customized structure designs.

2. fast module: This module is specifically designed for data produced by the SeekOne® DD Single Cell Full-length RNA Sequence Transcriptome-seq Kit, which is used for barcode extraction, paired-end read alignment, quantification, and unique metrics analysis for full-length transcriptome data.

3. vdj module: This module is specifically designed for data produced by the SeekOne® DD Single Cell Immune Profiling Kit, which is used for assembling, filtering, and annotating immune receptors.

4. utils module: The module contains other small tools.

• Download
• Installation Guide
• Tutorials
  • rna module
  • fast module
  • vdj module
  • utils module

• FAQ
• Release Notes